Prediction
Information
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Dear visitor, welcome to SVMHC.
Please note, that
Epitoolkit
also provides SVMHC as one of it's prediction methods.
MHC class I alleles
MHC class II alleles
None
A_0201 decamer
A_0201 nonamer
A_0301 decamer
A_0301 nonamer
A_1101 nonamer
A_11 decamer
A_11 nonamer
A_1 nonamer
A_2402 nonamer
A_2 decamer
A_2 nonamer
A_31 nonamer
A_3301 nonamer
A_3 nonamer
A_6801 nonamer
B_0702 nonamer
B_2703 nonamer
B_2705 nonamer
B_2706 nonamer
B_27 nonamer
B_3501 decamer
B_3501 nonamer
B_35 nonamer
B_5101 nonamer
B_5102 nonamer
B_5103 nonamer
B_51 nonamer
B_5301 nonamer
B_5401 nonamer
B_7 nonamer
B_8 nonamer
None
A_01 nonamer
A_0201 decamer
A_0201 nonamer
A_03 nonamer
A_03 decamer
A_1101 nonamer
A_1101 decamer
A_2402 nonamer
A_24 nonamer
A_25 nonamer
A_25 decamer
B_07 nonamer
B_08 octamer
B_08 nonamer
B_1501 decamer
B_1501 nonamer
B_1801 octamer
B_1801 nonamer
B_2705 nonamer
B_27 nonamer
B_27 decamer
B_3501 nonamer
B_3701 nonamer
B_40 nonamer
B_44 nonamer
B_5101 octamer
B_5101 nonamer
Cw_0401 nonamer
H2_Db nonamer
H2_Kb octamer
H2_Kd nonamer
H2_Ld nonamer
H2_Kk octamer
(MHCPEP data) (SYFPEITHI data)
None
DRB1_0101
DRB1_0102
DRB1_0301
DRB1_0305
DRB1_0306
DRB1_0307
DRB1_0308
DRB1_0309
DRB1_0311
DRB1_0401
DRB1_0402
DRB1_0404
DRB1_0405
DRB1_0408
DRB1_0410
DRB1_0421
DRB1_0423
DRB1_0426
DRB1_0701
DRB1_0703
DRB1_0801
DRB1_0802
DRB1_0804
DRB1_0806
DRB1_0813
DRB1_0817
DRB1_1101
DRB1_1102
DRB1_1104
DRB1_1106
DRB1_1107
DRB1_1114
DRB1_1120
DRB1_1121
DRB1_1128
DRB1_1301
DRB1_1302
DRB1_1304
DRB1_1305
DRB1_1307
DRB1_1311
DRB1_1321
DRB1_1322
DRB1_1323
DRB1_1327
DRB1_1328
DRB1_1501
DRB1_1502
DRB1_1506
DRB1_5_0101
DRB1_5_0105
Please, paste a sequence (one letter code) or use a database ID.
OR
Input a SWISSPROT AC/ID (e.g P05917/VPX_SIVM1) or RefSeq Id (e.g NP_055147):
Analysis of single amino acid polymorphisms
SVMHC also enables analysis of single point polymorphisms. Paste a sequence or use a database ID together with a given mutation to perform a comparative analysis. An example of a mutation is
A23P
, meaning that an alanine in position 23 of the protein is changed to a proline.