Proteomics

OpenMS/TOPP

OpenMS is an open source C++ library for LC/MS data management, reduction, evaluation, visualisation, storage and sophisticated statistical analyses. It can be used to develop MS related applications.

TOPP - The OpenMS Proteomics Pipeline is an array of applications based on OpenMS that demonstrate the power and flexibility of the framework.

The project is based at the Algorithmic Bioinformtics group at the Insitute of Computer Science at the Free University of Berlin and the Department for Simulation of Biological Systems at the Wilhelm Schickard Institute of the Tübingen University, Germany. Several other groups also work on OpenMS.

More details can be found on the OpenMS homepage.